From 94d3e79a8617f88dc0219cfdeedfa3147833719d Mon Sep 17 00:00:00 2001 From: Adrian Kummerlaender Date: Mon, 24 Jun 2019 14:43:36 +0200 Subject: Initialize at openlb-1-3 --- examples/turbulence/nozzle3d/Makefile | 105 ++++++++ examples/turbulence/nozzle3d/definitions.mk | 30 +++ examples/turbulence/nozzle3d/module.mk | 29 +++ examples/turbulence/nozzle3d/nozzle3d.cpp | 382 ++++++++++++++++++++++++++++ 4 files changed, 546 insertions(+) create mode 100644 examples/turbulence/nozzle3d/Makefile create mode 100644 examples/turbulence/nozzle3d/definitions.mk create mode 100644 examples/turbulence/nozzle3d/module.mk create mode 100644 examples/turbulence/nozzle3d/nozzle3d.cpp (limited to 'examples/turbulence/nozzle3d') diff --git a/examples/turbulence/nozzle3d/Makefile b/examples/turbulence/nozzle3d/Makefile new file mode 100644 index 0000000..a953954 --- /dev/null +++ b/examples/turbulence/nozzle3d/Makefile @@ -0,0 +1,105 @@ +# This file is part of the OpenLB library +# +# Copyright (C) 2007 Mathias Krause +# E-mail contact: info@openlb.net +# The most recent release of OpenLB can be downloaded at +# +# +# This program is free software; you can redistribute it and/or +# modify it under the terms of the GNU General Public License +# as published by the Free Software Foundation; either version 2 +# of the License, or (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public +# License along with this program; if not, write to the Free +# Software Foundation, Inc., 51 Franklin Street, Fifth Floor, +# Boston, MA 02110-1301, USA. + +########################################################################### +## definitions + +include definitions.mk + +include $(ROOT)/global.mk + +OBJECTS := $(foreach file, $(SRC), $(PWD)/$(file:.cpp=.o)) +DEPS := $(foreach file, $(SRC), $(PWD)/$(file:.cpp=.d)) + +########################################################################### +## all + +all : depend compile link + + +########################################################################### +## dependencies + +depend : $(DEPS) + +$(PWD)/%.d : %.cpp + @echo Create dependencies for $< + @$(SHELL) -ec '$(CXX) -M $(CXXFLAGS) $(IDIR) $< \ + | sed -e "s!$*\.o!$(PWD)\/$*\.o!1" > .tmpfile; \ + cp -f .tmpfile $@;' + +########################################################################### +## compile + +compile : $(OBJECTS) + +$(PWD)/%.o: %.cpp + @echo Compile $< + $(CXX) $(CXXFLAGS) $(IDIR) -c $< -o $@ + +########################################################################### +## clean + +clean : cleanrub cleanobj cleandep + +cleanrub: + @echo Clean rubbish files + @rm -f *~ core .tmpfile tmp/*.* $(OUTPUT) + @rm -f tmp/vtkData/*.* tmp/vtkData/data/*.* tmp/imageData/*.* tmp/gnuplotData/*.* tmp/gnuplotData/data/*.* + +cleanobj: + @echo Clean object files + @rm -f $(OBJECTS) + +cleandep: + @echo Clean dependencies files + @rm -f $(DEPS) + +cleanbuild: + @cd $(ROOT); \ + $(MAKE) cleanlib; + +########################################################################### +## update lib + +$(ROOT)/$(LIBDIR)/lib$(LIB).a : + @cd $(ROOT); \ + $(MAKE) all + +########################################################################### +## link + +link: $(OUTPUT) + +$(OUTPUT): $(OBJECTS) $(ROOT)/$(LIBDIR)/lib$(LIB).a + @echo Link $@ + $(CXX) $(foreach file, $(SRC), $(file:.cpp=.o)) $(LDFLAGS) -L$(ROOT)/$(LIBDIR) -l$(LIB) -lz -o $@ + +########################################################################### +## include dependencies + +ifneq "$(strip $(wildcard *.d))" "" + include $(foreach file,$(DEPS),$(file)) +endif + +########################################################################### +########################################################################### diff --git a/examples/turbulence/nozzle3d/definitions.mk b/examples/turbulence/nozzle3d/definitions.mk new file mode 100644 index 0000000..840f62d --- /dev/null +++ b/examples/turbulence/nozzle3d/definitions.mk @@ -0,0 +1,30 @@ +# This file is part of the OpenLB library +# +# Copyright (C) 2007 Mathias Krause +# E-mail contact: info@openlb.net +# The most recent release of OpenLB can be downloaded at +# +# +# This program is free software; you can redistribute it and/or +# modify it under the terms of the GNU General Public License +# as published by the Free Software Foundation; either version 2 +# of the License, or (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public +# License along with this program; if not, write to the Free +# Software Foundation, Inc., 51 Franklin Street, Fifth Floor, +# Boston, MA 02110-1301, USA. + + +########################################################################### +########################################################################### +## DEFINITIONS TO BE CHANGED + +ROOT := ../../.. +SRC := nozzle3d.cpp +OUTPUT := nozzle3d diff --git a/examples/turbulence/nozzle3d/module.mk b/examples/turbulence/nozzle3d/module.mk new file mode 100644 index 0000000..1190482 --- /dev/null +++ b/examples/turbulence/nozzle3d/module.mk @@ -0,0 +1,29 @@ +# This file is part of the OpenLB library +# +# Copyright (C) 2017 Markus Mohrhard +# E-mail contact: info@openlb.net +# The most recent release of OpenLB can be downloaded at +# +# +# This program is free software; you can redistribute it and/or +# modify it under the terms of the GNU General Public License +# as published by the Free Software Foundation; either version 2 +# of the License, or (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public +# License along with this program; if not, write to the Free +# Software Foundation, Inc., 51 Franklin Street, Fifth Floor, +# Boston, MA 02110-1301, USA. + +current_dir := $(dir $(word $(words $(MAKEFILE_LIST)),$(MAKEFILE_LIST))) + +include global.mk +include rules.mk +include $(addsuffix definitions.mk, $(current_dir)) + +$(eval $(call sample,$(current_dir)$(OUTPUT),$(addprefix $(current_dir), $(SRC)))) diff --git a/examples/turbulence/nozzle3d/nozzle3d.cpp b/examples/turbulence/nozzle3d/nozzle3d.cpp new file mode 100644 index 0000000..c736f78 --- /dev/null +++ b/examples/turbulence/nozzle3d/nozzle3d.cpp @@ -0,0 +1,382 @@ +/* Lattice Boltzmann sample, written in C++, using the OpenLB + * library + * + * Copyright (C) 2015 Mathias J. Krause, Patrick Nathan + * E-mail contact: info@openlb.net + * The most recent release of OpenLB can be downloaded at + * + * + * This program is free software; you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation; either version 2 + * of the License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public + * License along with this program; if not, write to the Free + * Software Foundation, Inc., 51 Franklin Street, Fifth Floor, + * Boston, MA 02110-1301, USA. + */ + +/* nozzle3d.cpp: + * This example examines a turbulent flow in a nozzle injection tube. At the + * main inlet, either a block profile or a power 1/7 profile is imposed as a + * Dirchlet velocity boundary condition, whereas at the outlet a + * Dirichlet pressure condition is set by p=0 (i.e. rho=1). + * + * The example shows the usage of turbulent models. + * + * The results of a simular simulation setup are publish in TODO + */ + +#include "olb3D.h" +#ifndef OLB_PRECOMPILED // Unless precompiled version is used +#include "olb3D.hh" // Include full template code +#endif +#include +#include +#include +#include + +using namespace olb; +using namespace olb::descriptors; +using namespace olb::graphics; +using namespace olb::util; +using namespace std; + +typedef double T; + +// Choose your turbulent model of choice +//#define RLB +#define Smagorinsky //default +//#define ConsitentStrainSmagorinsky +//#define ShearSmagorinsky +//#define Krause + +#ifdef ShearSmagorinsky +#define DESCRIPTOR ShearSmagorinskyD3Q19Descriptor +#else +#define DESCRIPTOR D3Q19<> +#endif + +// Parameters for the simulation setup +const int N = 3; // resolution of the model, for RLB N>=5, others N>=2, but N>=5 recommended +const int M = 1; // time discretization refinement +const int inflowProfileMode = 0; // block profile (mode=0), power profile (mode=1) +const T maxPhysT = 200.; // max. simulation time in s, SI unit + +template +class TurbulentVelocity3D : public AnalyticalF3D { + +protected: + // block profile (mode=0), power profile (mode=1) + int _mode; + T rho; + T nu; + T u0; + T p0; + T charL; + T dx; + +public: + TurbulentVelocity3D( UnitConverter const& converter, int mode=0 ) : AnalyticalF3D( 3 ) { + _mode = mode; + u0 = converter.getCharLatticeVelocity(); + rho = converter.getPhysDensity(); + nu = converter.getPhysViscosity(); + charL = converter.getCharPhysLength(); + p0 = converter.getCharPhysPressure(); + dx = converter.getConversionFactorLength(); + + this->getName() = "turbulentVelocity3d"; + }; + + bool operator()( T output[], const S input[] ) override { + T y = input[1]; + T z = input[2]; + // block profile inititalization + T u_calc = u0; + // power profile inititalization + if ( _mode==1 ) { + T obst_y = 5.5+dx; + T obst_z = 5.5+dx; + T obst_r = 0.5; + + T B = 5.5; + T kappa = 0.4; + T ReTau = 183.6; + + u_calc = u0/7.*( 2.*nu*ReTau/( charL*kappa )*log( fabs( 2.*ReTau/charL*( obst_r - sqrt( pow( y - obst_y, 2. ) + + pow( z - obst_z, 2. ) ) )*1.5*( 1 + sqrt( pow( y - obst_y, 2. ) + + pow( z - obst_z, 2. ) )/obst_r )/( 1 + 2.*pow( sqrt( pow( y - obst_y, 2. ) + + pow( z - obst_z, 2. ) )/obst_r, 2. ) ) ) + B ) ); + } + T a = -1., b = 1.; + T nRandom = rand()/( T )RAND_MAX*( b-a ) + a; + + output[0] = u_calc+ 0.15*u0*nRandom; + output[1] = 0.15*u0*nRandom; + output[2] = 0.15*u0*nRandom; + return true; + }; +}; + + +void prepareGeometry( UnitConverter const& converter, IndicatorF3D& indicator, SuperGeometry3D& superGeometry ) { + + OstreamManager clout( std::cout,"prepareGeometry" ); + clout << "Prepare Geometry ..." << std::endl; + + // Sets material number for fluid and boundary + superGeometry.rename( 0,2,indicator ); + + Vector origin( T(), + 5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(), + 5.5*converter.getCharPhysLength()+converter.getConversionFactorLength() ); + + Vector extend( 4.*converter.getCharPhysLength()+5*converter.getConversionFactorLength(), + 5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(), + 5.5*converter.getCharPhysLength()+converter.getConversionFactorLength() ); + + IndicatorCylinder3D inletCylinder( extend, origin, converter.getCharPhysLength() ); + superGeometry.rename( 2,1,inletCylinder ); + + + origin[0]=4.*converter.getCharPhysLength(); + origin[1]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + origin[2]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + + extend[0]=54.*converter.getCharPhysLength(); + extend[1]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + extend[2]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + + IndicatorCylinder3D injectionTube( extend, origin, 5.5*converter.getCharPhysLength() ); + superGeometry.rename( 2,1,injectionTube ); + + origin[0]=converter.getConversionFactorLength(); + origin[1]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + origin[2]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + + extend[0]=T(); + extend[1]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + extend[2]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + + IndicatorCylinder3D cylinderIN( extend, origin, converter.getCharPhysLength() ); + superGeometry.rename( 1,3,cylinderIN ); + + + origin[0]=54.*converter.getCharPhysLength()-converter.getConversionFactorLength(); + origin[1]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + origin[2]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + + extend[0]=54.*converter.getCharPhysLength(); + extend[1]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + extend[2]=5.5*converter.getCharPhysLength()+converter.getConversionFactorLength(); + + IndicatorCylinder3D cylinderOUT( extend, origin, 5.5*converter.getCharPhysLength() ); + superGeometry.rename( 1,4,cylinderOUT ); + + // Removes all not needed boundary voxels outside the surface + superGeometry.clean(); + // Removes all not needed boundary voxels inside the surface + superGeometry.innerClean(); + superGeometry.checkForErrors(); + + superGeometry.print(); + + clout << "Prepare Geometry ... OK" << std::endl; +} + +void prepareLattice( SuperLattice3D& sLattice, + UnitConverter const& converter, + Dynamics& bulkDynamics, + sOnLatticeBoundaryCondition3D& bc, + sOffLatticeBoundaryCondition3D& offBc, + SuperGeometry3D& superGeometry ) { + + + + OstreamManager clout( std::cout,"prepareLattice" ); + clout << "Prepare Lattice ..." << std::endl; + + const T omega = converter.getLatticeRelaxationFrequency(); + + // Material=0 -->do nothing + sLattice.defineDynamics( superGeometry, 0, &instances::getNoDynamics() ); + + // Material=1 -->bulk dynamics + // Material=3 -->bulk dynamics (inflow) + // Material=4 -->bulk dynamics (outflow) + sLattice.defineDynamics( superGeometry.getMaterialIndicator({1, 3, 4}), &bulkDynamics ); + + // Material=2 -->bounce back + sLattice.defineDynamics( superGeometry, 2, &instances::getBounceBack() ); + + bc.addVelocityBoundary( superGeometry, 3, omega ); + bc.addPressureBoundary( superGeometry, 4, omega ); + + clout << "Prepare Lattice ... OK" << std::endl; +} + +void setBoundaryValues( UnitConverter const&converter, + SuperLattice3D& lattice, SuperGeometry3D& superGeometry, int iT ) { + + OstreamManager clout( std::cout,"setBoundaryValues" ); + + if ( iT==0 ) { + AnalyticalConst3D rhoF( 1 ); + std::vector velocity( 3,T() ); + AnalyticalConst3D uF( velocity ); + + // Seeding of random fluctuations and definition of the velocity field + srand( time( nullptr ) ); + TurbulentVelocity3D uSol( converter, inflowProfileMode ); + + lattice.iniEquilibrium( superGeometry.getMaterialIndicator({1, 2, 4}), rhoF, uF ); + lattice.iniEquilibrium( superGeometry, 3, rhoF, uSol ); + + lattice.defineU( superGeometry, 3, uSol ); + lattice.defineRho( superGeometry, 4, rhoF ); + + // Make the lattice ready for simulation + lattice.initialize(); + } +} + +void getResults( SuperLattice3D& sLattice, + UnitConverter const& converter, int iT, + SuperGeometry3D& superGeometry, Timer& timer ) { + + OstreamManager clout( std::cout,"getResults" ); + SuperVTMwriter3D vtmWriter( "nozzle3d" ); + + if ( iT==0 ) { + // Writes the geometry, cuboid no. and rank no. as vti file for visualization + SuperLatticeGeometry3D geometry( sLattice, superGeometry ); + SuperLatticeCuboid3D cuboid( sLattice ); + SuperLatticeRank3D rank( sLattice ); + vtmWriter.write( geometry ); + vtmWriter.write( cuboid ); + vtmWriter.write( rank ); + vtmWriter.createMasterFile(); + } + + // Writes the vtk files + if ( iT%converter.getLatticeTime( maxPhysT/100. )==0 ) { + // Create the data-reading functors... + SuperLatticePhysVelocity3D velocity( sLattice, converter ); + SuperLatticePhysPressure3D pressure( sLattice, converter ); + vtmWriter.addFunctor( velocity ); + vtmWriter.addFunctor( pressure ); + vtmWriter.write( iT ); + + SuperEuklidNorm3D normVel( velocity ); + BlockReduction3D2D planeReduction( normVel, {0, 1, 0} ); + // write output as JPEG + heatmap::write(planeReduction, iT); + } + + // Writes output on the console + if ( iT%converter.getLatticeTime( maxPhysT/200. )==0 ) { + timer.update( iT ); + timer.printStep(); + sLattice.getStatistics().print( iT, converter.getPhysTime( iT ) ); + } +} + + + +int main( int argc, char* argv[] ) { + + // === 1st Step: Initialization === + + olbInit( &argc, &argv ); + singleton::directories().setOutputDir( "./tmp/" ); + OstreamManager clout( std::cout,"main" ); + // display messages from every single mpi process + // clout.setMultiOutput(true); + + UnitConverterFromResolutionAndRelaxationTime const converter( + int {N}, // resolution: number of voxels per charPhysL + (T) 0.500018, // latticeRelaxationTime: relaxation time, have to be greater than 0.5! + (T) 1, // charPhysLength: reference length of simulation geometry + (T) 1, // charPhysVelocity: maximal/highest expected velocity during simulation in __m / s__ + (T) 0.0002, // physViscosity: physical kinematic viscosity in __m^2 / s__ + (T) 1.0 // physDensity: physical density in __kg / m^3__ + ); + // Prints the converter log as console output + converter.print(); + // Writes the converter log in a file + converter.write("nozzle3d"); + + Vector origin; + Vector extend( 54.*converter.getCharPhysLength(), 11.*converter.getCharPhysLength()+2.*converter.getConversionFactorLength(), 11.*converter.getCharPhysLength()+2.*converter.getConversionFactorLength() ); + + IndicatorCuboid3D cuboid( extend,origin ); + + CuboidGeometry3D cuboidGeometry( cuboid, converter.getConversionFactorLength(), singleton::mpi().getSize() ); + HeuristicLoadBalancer loadBalancer( cuboidGeometry ); + + // === 2nd Step: Prepare Geometry === + + SuperGeometry3D superGeometry( cuboidGeometry, loadBalancer, 2 ); + prepareGeometry( converter, cuboid, superGeometry ); + + // === 3rd Step: Prepare Lattice === + + SuperLattice3D sLattice( superGeometry ); + + Dynamics* bulkDynamics; + const T omega = converter.getLatticeRelaxationFrequency(); +#if defined(RLB) + bulkDynamics = new RLBdynamics( omega, instances::getBulkMomenta() ); +#elif defined(Smagorinsky) + bulkDynamics = new SmagorinskyBGKdynamics( omega, instances::getBulkMomenta(), + 0.15); +#elif defined(ShearSmagorinsky) + bulkDynamics = new ShearSmagorinskyBGKdynamics( omega, instances::getBulkMomenta(), + 0.15); +#elif defined(Krause) + bulkDynamics = new KrauseBGKdynamics( omega, instances::getBulkMomenta(), + 0.15); +#else //ConsitentStrainSmagorinsky + bulkDynamics = new ConStrainSmagorinskyBGKdynamics( omega, instances::getBulkMomenta(), + 0.05); +#endif + + sOnLatticeBoundaryCondition3D sBoundaryCondition( sLattice ); + createInterpBoundaryCondition3D ( sBoundaryCondition ); + + sOffLatticeBoundaryCondition3D sOffBoundaryCondition( sLattice ); + createBouzidiBoundaryCondition3D ( sOffBoundaryCondition ); + + prepareLattice( sLattice, converter, *bulkDynamics, sBoundaryCondition, sOffBoundaryCondition, superGeometry ); + + // === 4th Step: Main Loop with Timer === + + Timer timer( converter.getLatticeTime( maxPhysT ), superGeometry.getStatistics().getNvoxel() ); + timer.start(); + + for ( int iT = 0; iT <= converter.getLatticeTime( maxPhysT ); ++iT ) { + // === 5ath Step: Apply filter +#ifdef ADM + SuperLatticeADM3D admF( sLattice, 0.01, 2 ); + admF.execute( superGeometry, 1 ); +#endif + // === 5bth Step: Definition of Initial and Boundary Conditions === + setBoundaryValues( converter, sLattice, superGeometry, iT ); + + // === 6th Step: Collide and Stream Execution === + sLattice.collideAndStream(); + + // === 7th Step: Computation and Output of the Results === + getResults( sLattice, converter, iT, superGeometry, timer ); + } + timer.stop(); + timer.printSummary(); + delete bulkDynamics; +} -- cgit v1.2.3