Initialize at openlb-1-3

1 files changed, 392 insertions, 0 deletions

diff --git a/src/geometry/superGeometryStatistics2D.hh b/src/geometry/superGeometryStatistics2D.hh
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+/*  This file is part of the OpenLB library
+ *
+ *  Copyright (C) 2013, 2014 Mathias J. Krause
+ *  E-mail contact: info@openlb.net
+ *  The most recent release of OpenLB can be downloaded at
+ *  <http://www.openlb.net/>
+ *
+ *  This program is free software; you can redistribute it and/or
+ *  modify it under the terms of the GNU General Public License
+ *  as published by the Free Software Foundation; either version 2
+ *  of the License, or (at your option) any later version.
+ *
+ *  This program is distributed in the hope that it will be useful,
+ *  but WITHOUT ANY WARRANTY; without even the implied warranty of
+ *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ *  GNU General Public License for more details.
+ *
+ *  You should have received a copy of the GNU General Public
+ *  License along with this program; if not, write to the Free
+ *  Software Foundation, Inc., 51 Franklin Street, Fifth Floor,
+ *  Boston, MA  02110-1301, USA.
+ */
+
+/** \file
+ * Representation of a statistic for a parallel 2D geometry -- generic implementation.
+ */
+
+#include <iostream>
+#include <cmath>
+#include <math.h>
+#include <sstream>
+
+#include "geometry/superGeometry2D.h"
+#include "geometry/superGeometryStatistics2D.h"
+#include "core/olbDebug.h"
+
+namespace olb {
+
+template<typename T>
+SuperGeometryStatistics2D<T>::SuperGeometryStatistics2D(SuperGeometry2D<T>* superGeometry)
+  : _superGeometry(superGeometry), _statisticsUpdateNeeded(true), _overlap(superGeometry->getOverlap()), clout(std::cout,"SuperGeometryStatistics2D")
+{
+}
+
+template<typename T>
+SuperGeometryStatistics2D<T>::SuperGeometryStatistics2D(SuperGeometryStatistics2D const& rhs)
+  : _superGeometry(rhs._superGeometry), _statisticsUpdateNeeded(true), _overlap(rhs._superGeometry->getOverlap() ), clout(std::cout,"SuperGeometryStatistics2D")
+{
+}
+
+template<typename T>
+SuperGeometryStatistics2D<T>& SuperGeometryStatistics2D<T>::operator=(SuperGeometryStatistics2D const& rhs)
+{
+  _superGeometry = rhs._superGeometry;
+  _statisticsUpdateNeeded = true;
+  _overlap = rhs._overlap;
+  return *this;
+}
+
+
+template<typename T>
+bool& SuperGeometryStatistics2D<T>::getStatisticsStatus()
+{
+  return _statisticsUpdateNeeded;
+}
+
+template<typename T>
+bool const & SuperGeometryStatistics2D<T>::getStatisticsStatus() const
+{
+  return _statisticsUpdateNeeded;
+}
+
+
+template<typename T>
+void SuperGeometryStatistics2D<T>::update(bool verbose)
+{
+
+#ifdef PARALLEL_MODE_MPI
+  int updateReallyNeededGlobal = 0;
+  if (_statisticsUpdateNeeded ) {
+    updateReallyNeededGlobal = 1;
+  }
+  singleton::mpi().reduceAndBcast(updateReallyNeededGlobal, MPI_SUM);
+  if (updateReallyNeededGlobal>0) {
+    _statisticsUpdateNeeded = true;
+  }
+  //singleton::mpi().reduceAndBcast(_statisticsUpdateNeeded, MPI_LOR);
+#endif
+
+  // check if update is really needed
+  if (_statisticsUpdateNeeded ) {
+    int updateReallyNeeded = 0;
+    for (int iCloc=0; iCloc<_superGeometry->getLoadBalancer().size(); iCloc++) {
+      if (_superGeometry->getBlockGeometry(iCloc).getStatistics().getStatisticsStatus() ) {
+        _superGeometry->getBlockGeometry(iCloc).getStatistics().update(false);
+        updateReallyNeeded++;
+      }
+    }
+
+
+#ifdef PARALLEL_MODE_MPI
+    singleton::mpi().reduceAndBcast(updateReallyNeeded, MPI_SUM);
+#endif
+
+    if (updateReallyNeeded==0) {
+      _statisticsUpdateNeeded = false;
+      //      clout << "almost updated" << std::endl;
+      return;
+    }
+
+
+    // get total number of different materials right
+    _material2n = std::map<int, int>();
+    _nMaterials = int();
+    for (int iCloc=0; iCloc<_superGeometry->getLoadBalancer().size(); iCloc++) {
+      if (_superGeometry->getBlockGeometry(iCloc).getStatistics(false).getNmaterials() > 0) {
+        _nMaterials = _superGeometry->getBlockGeometry(iCloc).getStatistics(false).getNmaterials();
+      }
+    }
+
+
+#ifdef PARALLEL_MODE_MPI
+    singleton::mpi().reduceAndBcast(_nMaterials, MPI_SUM);
+#endif
+
+    // store the number and min., max. possition for each rank
+    for (int iCloc=0; iCloc<_superGeometry->getLoadBalancer().size(); iCloc++) {
+      std::map<int, int> material2n = _superGeometry->getBlockGeometry(iCloc).getStatistics(false).getMaterial2n();
+      std::map<int, int>::iterator iter;
+
+      for (iter = material2n.begin(); iter != material2n.end(); iter++) {
+        if (iter->second!=0) {
+          std::vector<T> minPhysR = _superGeometry->getBlockGeometry(iCloc).getStatistics(false).getMinPhysR(iter->first);
+          std::vector<T> maxPhysR = _superGeometry->getBlockGeometry(iCloc).getStatistics(false).getMaxPhysR(iter->first);
+          if (_material2n.count(iter->first) == 0) {
+            _material2n[iter->first] = iter->second;
+            _material2min[iter->first] = minPhysR;
+            _material2max[iter->first] = maxPhysR;
+            //std::cout << iter->first<<":"<<_material2n[iter->first]<<std::endl;
+          } else {
+            _material2n[iter->first] += iter->second;
+            for (int iDim=0; iDim<2; iDim++) {
+              if (_material2min[iter->first][iDim] > minPhysR[iDim]) {
+                _material2min[iter->first][iDim] = minPhysR[iDim];
+              }
+              if (_material2max[iter->first][iDim] < maxPhysR[iDim]) {
+                _material2max[iter->first][iDim] = maxPhysR[iDim];
+              }
+            }
+            //std::cout << iter->first<<":"<<_material2n[iter->first]<<std::endl;
+          }
+        }
+      }
+    }
+
+    // store the number and min., max. possition for all ranks
+#ifdef PARALLEL_MODE_MPI
+    int materials[_nMaterials];
+    int materialsInBuf[_nMaterials];
+    int materialCount[_nMaterials];
+    int materialCountInBuf[_nMaterials];
+    T materialMinR[2*_nMaterials];
+    T materialMaxR[2*_nMaterials];
+    T materialMinRinBuf[2*_nMaterials];
+    T materialMaxRinBuf[2*_nMaterials];
+
+    for (int iM=0; iM<_nMaterials; iM++) {
+      materials[iM]=-1;
+      materialCount[iM]=0;
+      for (int iDim=0; iDim<2; iDim++) {
+        materialMinRinBuf[2*iM + iDim] = T();
+        materialMaxRinBuf[2*iM + iDim] = T();
+      }
+    }
+    int counter = 0;
+    std::map<int, int>::iterator iMaterial;
+    for (iMaterial = _material2n.begin(); iMaterial != _material2n.end(); iMaterial++) {
+      materials[counter] = iMaterial->first;
+      materialCount[counter] = iMaterial->second;
+      for (int iDim=0; iDim<2; iDim++) {
+        materialMinR[2*counter + iDim] = _material2min[iMaterial->first][iDim];
+        materialMaxR[2*counter + iDim] = _material2max[iMaterial->first][iDim];
+      }
+      counter++;
+    }
+
+    for (int iRank=1; iRank<singleton::mpi().getSize(); iRank++) {
+      int myRank = singleton::mpi().getRank();
+      singleton::mpi().sendRecv(materials, materialsInBuf, _nMaterials, (myRank+iRank)%singleton::mpi().getSize(), (myRank-iRank+singleton::mpi().getSize())%singleton::mpi().getSize(), 0);
+      singleton::mpi().sendRecv(materialCount, materialCountInBuf, _nMaterials, (myRank+iRank)%singleton::mpi().getSize(), (myRank-iRank+singleton::mpi().getSize())%singleton::mpi().getSize(), 1);
+      singleton::mpi().sendRecv(materialMinR, materialMinRinBuf, 2*_nMaterials, (myRank+iRank)%singleton::mpi().getSize(), (myRank-iRank+singleton::mpi().getSize())%singleton::mpi().getSize(), 2);
+      singleton::mpi().sendRecv(materialMaxR, materialMaxRinBuf, 2*_nMaterials, (myRank+iRank)%singleton::mpi().getSize(), (myRank-iRank+singleton::mpi().getSize())%singleton::mpi().getSize(), 2);
+      for (int iM=0; iM<_nMaterials; iM++) {
+        if (materialsInBuf[iM]!=-1) {
+          std::vector<T> minPhysR(2,T());
+          std::vector<T> maxPhysR(2,T());
+          for (int iDim=0; iDim<2; iDim++) {
+            minPhysR[iDim] = materialMinRinBuf[2*iM + iDim];
+            maxPhysR[iDim] = materialMaxRinBuf[2*iM + iDim];
+          }
+          if (_material2n.count(materialsInBuf[iM]) == 0) {
+            _material2n[materialsInBuf[iM]] = materialCountInBuf[iM];
+            _material2min[materialsInBuf[iM]] = minPhysR;
+            _material2max[materialsInBuf[iM]] = maxPhysR;
+          } else {
+            _material2n[materialsInBuf[iM]] += materialCountInBuf[iM];
+            for (int iDim=0; iDim<2; iDim++) {
+              if (_material2min[materialsInBuf[iM]][iDim] > minPhysR[iDim]) {
+                _material2min[materialsInBuf[iM]][iDim] = minPhysR[iDim];
+              }
+              if (_material2max[materialsInBuf[iM]][iDim] < maxPhysR[iDim]) {
+                _material2max[materialsInBuf[iM]][iDim] = maxPhysR[iDim];
+              }
+            }
+          }
+        }
+      }
+    }
+#endif
+
+    //clout.setMultiOutput(true);
+    //print();
+    //clout.setMultiOutput(false);
+
+    if (verbose) {
+      clout << "updated" << std::endl;
+    }
+    _statisticsUpdateNeeded = false;
+  }
+}
+
+template<typename T>
+int SuperGeometryStatistics2D<T>::getNmaterials()
+{
+  update();
+  return _nMaterials;
+}
+
+template<typename T>
+int SuperGeometryStatistics2D<T>::getNvoxel(int material)
+{
+  update(true);
+  return _material2n[material];
+}
+
+template<typename T>
+int SuperGeometryStatistics2D<T>::getNvoxel()
+{
+  update();
+  int total = 0;
+  std::map<int, int>::iterator iter;
+  for (iter = _material2n.begin(); iter != _material2n.end(); iter++) {
+    if (iter->first!=0) {
+      total+=iter->second;
+    }
+  }
+  return total;
+}
+
+template<typename T>
+std::vector<T> SuperGeometryStatistics2D<T>::getMinPhysR(int material)
+{
+  update();
+  return _material2min[material];
+}
+
+template<typename T>
+std::vector<T> SuperGeometryStatistics2D<T>::getMaxPhysR(int material)
+{
+  update();
+  return _material2max[material];
+}
+
+template<typename T>
+std::vector<T> SuperGeometryStatistics2D<T>::getPhysExtend(int material)
+{
+  update();
+  std::vector<T> extend;
+  for (int iDim = 0; iDim < 2; iDim++) {
+    extend.push_back(_material2max[material][iDim] - _material2min[material][iDim]);
+  }
+  return extend;
+}
+
+template<typename T>
+std::vector<T> SuperGeometryStatistics2D<T>::getPhysRadius(int material)
+{
+  update();
+  std::vector<T> radius;
+  for (int iDim=0; iDim<2; iDim++) {
+    radius.push_back((getMaxPhysR(material)[iDim] - getMinPhysR(material)[iDim])/2.);
+  }
+  return radius;
+}
+
+template<typename T>
+std::vector<T> SuperGeometryStatistics2D<T>::getCenterPhysR(int material)
+{
+  update();
+  std::vector<T> center;
+  for (int iDim=0; iDim<2; iDim++) {
+    center.push_back(getMinPhysR(material)[iDim] + getPhysRadius(material)[iDim]);
+  }
+  return center;
+}
+
+template<typename T>
+std::vector<int> SuperGeometryStatistics2D<T>::getType(int iC, int iX, int iY)
+{
+  update();
+  int iCloc=_superGeometry->getLoadBalancer().loc(iC);
+  std::vector<int> discreteNormal = _superGeometry->getExtendedBlockGeometry(iCloc).getStatistics(false).getType(iX+_overlap, iY+_overlap);
+  return discreteNormal;
+}
+
+template<typename T>
+std::vector<T> SuperGeometryStatistics2D<T>::computeNormal(int material)
+{
+  update();
+
+  std::vector<T> normal (2,int());
+  for (int iCloc=0; iCloc<_superGeometry->getLoadBalancer().size(); iCloc++) {
+    for (int iDim=0; iDim<2; iDim++) {
+      if (_superGeometry->getBlockGeometry(iCloc).getStatistics(false).getNvoxel(material)!=0) {
+        normal[iDim] += _superGeometry->getBlockGeometry(iCloc).getStatistics(false).computeNormal(material)[iDim]*_superGeometry->getBlockGeometry(iCloc).getStatistics(false).getNvoxel(material);
+      }
+    }
+  }
+
+#ifdef PARALLEL_MODE_MPI
+  for (int iDim=0; iDim<2; iDim++) {
+    singleton::mpi().reduceAndBcast((normal[iDim]), MPI_SUM);
+  }
+#endif
+
+  int nVoxel = getNvoxel(material);
+  if (nVoxel != 0) {
+    for (int iDim=0; iDim<2; iDim++) {
+      normal[iDim] /= nVoxel;
+    }
+  }
+  OLB_ASSERT(nVoxel || (normal[0] == 0 && normal[1] == 0), "if no voxels found we expect the normal to be zero");
+
+  T norm = sqrt(normal[0]*normal[0]+normal[1]*normal[1]);
+  if (norm>0.) {
+    normal[0]/=norm;
+    normal[1]/=norm;
+  }
+  return normal;
+}
+
+template<typename T>
+std::vector<int> SuperGeometryStatistics2D<T>::computeDiscreteNormal(int material, T maxNorm)
+{
+  update();
+  std::vector<T> normal = computeNormal(material);
+  std::vector<int> discreteNormal(2,int(0));
+
+  T smallestAngle = T(0);
+  for (int iX = -1; iX<=1; iX++) {
+    for (int iY = -1; iY<=1; iY++) {
+      T norm = sqrt(iX*iX+iY*iY);
+      if (norm>0.&& norm<maxNorm) {
+        T angle = (iX*normal[0] + iY*normal[1])/norm;
+        if (angle>=smallestAngle) {
+          smallestAngle=angle;
+          discreteNormal[0] = iX;
+          discreteNormal[1] = iY;
+        }
+      }
+    }
+  }
+  return discreteNormal;
+}
+
+
+template<typename T>
+void SuperGeometryStatistics2D<T>::print()
+{
+  update();
+  std::map<int, int>::iterator iter;
+  for (iter = _material2n.begin(); iter != _material2n.end(); iter++) {
+    clout << "materialNumber=" << iter->first
+          << "; count=" << iter->second
+          << "; minPhysR=(" << _material2min[iter->first][0] <<","<< _material2min[iter->first][1] <<")"
+          << "; maxPhysR=(" << _material2max[iter->first][0] <<","<< _material2max[iter->first][1] <<")"
+          << std::endl;
+  }
+}
+
+
+} // namespace olb